Publications: Daniel Gage
2024
- Enhanced transport of bacteria along root systems by protists can impact plant health.
Micciulla JL, Shor LM, Gage DJ
Applied and environmental microbiology (2024) 90(4):e0201123 PMC4579469 10.1111/j.1574-6968.1986.tb01733.x 2023
- Soil Protists Can Actively Redistribute Beneficial Bacteria along Medicago truncatula Roots.
Hawxhurst CJ, Micciulla JL, Bridges CM, Shor M, Gage DJ, Shor LM
Applied and environmental microbiology (2023) 89(3):e0181922 PMC10057870 10.1094/PBIOMES-05-20-0040-TA 2022
- Causes of infant deaths and patterns of associated factors in Eastern Ethiopia: Results of verbal autopsy (InterVA-4) study.
Mebrahtom S, Worku A, Gage DJ
PloS one (2022) 17(8):e0270245 PMC2779934 10.4269/ajtmh.2008.78.106 - The risk of water, sanitation and hygiene on diarrhea-related infant mortality in eastern Ethiopia: a population-based nested case-control.
Mebrahtom S, Worku A, Gage DJ
BMC public health (2022) 22(1):343 PMC6743165 10.1186/s12889-019-7273-4 - Simultaneous Single-Cell Genome and Transcriptome Sequencing of Termite Hindgut Protists Reveals Metabolic and Evolutionary Traits of Their Endosymbionts.
Stephens ME, Benjamino J, Graf J, Gage DJ
mSphere (2022) 7(1):e0002122 PMC3424584 10.1093/nar/gks596 2021
- 18S rRNA gene amplicon sequencing combined with culture-based surveys of maize rhizosphere protists reveal dominant, plant-enriched and culturable community members.
Taerum SJ, Micciulla J, Corso G, Steven B, Gage DJ, Triplett LR
Environmental microbiology reports (2021) 14(1):110-118 10.1111/1758-2229.13038 - Draft Genome Sequences of sp. Strains GY75 and GY617, Isolated from the Hindgut of Reticulitermes flavipes.
Bridges CM, Gage DJ
Microbiology resource announcements (2021) 10(12): PMC7996457 10.1128/MRA.00079-21 - Draft Genome Sequences of sp. Strains BGC7 and HGC4, Isolated from the Hindgut of a Lower Termite.
Bridges CM, Nelson MC, Graf J, Gage DJ
Microbiology resource announcements (2021) 10(4): PMC7844080 10.1128/MRA.01427-20 - Optogenetics in Enables Spatial Control of Exopolysaccharide Production and Biofilm Structure.
Pirhanov A, Bridges CM, Goodwin RA, Guo YS, Furrer J, Shor LM, Gage DJ, Cho YK
ACS synthetic biology (2021) 10(2):345-356 10.1021/acssynbio.0c00498 2020
- Development and application of aerobic, chemically defined media for Dysgonomonas.
Bridges CM, Gage DJ
Anaerobe (2020) 67:102302 10.1016/j.anaerobe.2020.102302 - Single-cell amplicon sequencing reveals community structures and transmission trends of protist-associated bacteria in a termite host.
Stephens ME, Gage DJ
PloS one (2020) 15(5):e0233065 PMC7228121 10.1371/journal.pone.0233065 2015
- Protist-facilitated particle transport using emulated soil micromodels.
Rubinstein RL, Kadilak AL, Cousens VC, Gage DJ, Shor LM
Environ. Sci. Technol. (2015) 49(3):1384-91 2014
- Biochemical characterization of a nitrogen-type phosphotransferase system reveals that enzyme EI(Ntr) integrates carbon and nitrogen signaling in Sinorhizobium meliloti.
Goodwin RA, Gage DJ
J. Bacteriol. (2014) 196(10):1901-7 (PMC4011000) 2013
- NMR structure of the HWE kinase associated response regulator Sma0114 in its activated state.
Sheftic SR, White E, Gage DJ, Alexandrescu AT
Biochemistry (2013) 53(2):311-22 - Better to light a candle than curse the darkness: illuminating spatial localization and temporal dynamics of rapid microbial growth in the rhizosphere.
Herron PM, Gage DJ, Arango Pinedo C, Haider ZK, Cardon ZG
Front Plant Sci (2013) 4:323 (PMC3759012) 2012
- Nuclear magnetic resonance structure and dynamics of the response regulator Sma0114 from Sinorhizobium meliloti.
Sheftic SR, Garcia PP, White E, Robinson VL, Gage DJ, Alexandrescu AT
Biochemistry (2012) 51(35):6932-41 (PMC4346371) 2010
- NMR assignments for the Sinorhizobium meliloti response regulator Sma0114.
Sheftic SR, Garcia PP, Robinson VL, Gage DJ, Alexandrescu AT
Biomol NMR Assign (2010) 5(1):55-8 (PMC4343204) - Characterization of a two-component regulatory system that regulates succinate-mediated catabolite repression in Sinorhizobium meliloti.
Garcia PP, Bringhurst RM, Arango Pinedo C, Gage DJ
J. Bacteriol. (2010) 192(21):5725-35 (PMC2953702) 2009
- Micro-scale water potential gradients visualized in soil around plant root tips using microbiosensors.
Herron PM, Gage DJ, Cardon ZG
Plant Cell Environ. (2009) 33(2):199-210 - Plasmids that insert into the rhamnose utilization locus, rha: a versatile tool for genetic studies in Sinorhizobium meliloti.
Arango Pinedo C, Gage DJ
J. Mol. Microbiol. Biotechnol. (2009) 17(4):201-10 2008
- HPrK regulates succinate-mediated catabolite repression in the gram-negative symbiont Sinorhizobium meliloti.
Pinedo CA, Gage DJ
J. Bacteriol. (2008) 191(1):298-309 (PMC2612420) - Sinorhizobium meliloti mutants lacking phosphotransferase system enzyme HPr or EIIA are altered in diverse processes, including carbon metabolism, cobalt requirements, and succinoglycan production.
Pinedo CA, Bringhurst RM, Gage DJ
J. Bacteriol. (2008) 190(8):2947-56 (PMC2293241) 2005
- Architecture of infection thread networks in developing root nodules induced by the symbiotic bacterium Sinorhizobium meliloti on Medicago truncatula.
Monahan-Giovanelli H, Pinedo CA, Gage DJ
Plant Physiol. (2005) 140(2):661-70 (PMC1361332) 2004
- Infection and invasion of roots by symbiotic, nitrogen-fixing rhizobia during nodulation of temperate legumes.
Gage DJ
Microbiol. Mol. Biol. Rev. (2004) 68(2):280-300 (PMC419923) 2003
- Transcriptional control of a rRNA promoter of the nodulating symbiont Sinorhizobium meliloti.
Rosado M, Gage DJ
FEMS Microbiol. Lett. (2003) 226(1):15-22 2002
- Analysis of infection thread development using Gfp- and DsRed-expressing Sinorhizobium meliloti.
Gage DJ
J. Bacteriol. (2002) 184(24):7042-6 (PMC135452) - Control of inducer accumulation plays a key role in succinate-mediated catabolite repression in Sinorhizobium meliloti.
Bringhurst RM, Gage DJ
J. Bacteriol. (2002) 184(19):5385-92 (PMC135350) 2001
- Galactosides in the rhizosphere: utilization by Sinorhizobium meliloti and development of a biosensor.
Bringhurst RM, Cardon ZG, Gage DJ
Proc. Natl. Acad. Sci. U.S.A. (2001) 98(8):4540-5 (PMC31870)